CDS

Accession Number TCMCG074C10219
gbkey CDS
Protein Id KAF8391826.1
Location join(8211487..8211622,8211718..8211839,8220001..8220064,8221412..8221480,8222396..8222574,8226932..8227002,8227327..8227409,8227494..8227585,8227775..8227916,8227991..8228127,8229283..8229366,8230300..8230443)
Organism Tetracentron sinense
locus_tag HHK36_022164

Protein

Length 440aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA625382, BioSample:SAMN14615867
db_source JABCRI010000016.1
Definition hypothetical protein HHK36_022164 [Tetracentron sinense]
Locus_tag HHK36_022164

EGGNOG-MAPPER Annotation

COG_category L
Description Bifunctional DNA N-glycosylase with associated apurinic apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N- glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10773        [VIEW IN KEGG]
EC 4.2.99.18        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03410        [VIEW IN KEGG]
map03410        [VIEW IN KEGG]
GOs GO:0000702        [VIEW IN EMBL-EBI]
GO:0000703        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003906        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006284        [VIEW IN EMBL-EBI]
GO:0006285        [VIEW IN EMBL-EBI]
GO:0006289        [VIEW IN EMBL-EBI]
GO:0006296        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006479        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008170        [VIEW IN EMBL-EBI]
GO:0008213        [VIEW IN EMBL-EBI]
GO:0008276        [VIEW IN EMBL-EBI]
GO:0008757        [VIEW IN EMBL-EBI]
GO:0009295        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016278        [VIEW IN EMBL-EBI]
GO:0016279        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016798        [VIEW IN EMBL-EBI]
GO:0016799        [VIEW IN EMBL-EBI]
GO:0018022        [VIEW IN EMBL-EBI]
GO:0018193        [VIEW IN EMBL-EBI]
GO:0018205        [VIEW IN EMBL-EBI]
GO:0019104        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0033683        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042644        [VIEW IN EMBL-EBI]
GO:0042646        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTCTCATTCTCTTCAGAAATTATGTTCTTCCATTTCCTTCTTTGCAACTCAACTGTAAAATGTCGAAAACAAGACTTTTTGCCCAAAAGATTCCATCAAAACCCGAAATCCCCCATCCTGACGTGAAACCAGGTTCTGATTCTTCTAATGTTGTTTCTGGGCAAGAGGTTCGTATGTATGCTAGGAAAAAAAGAGTGAGACGGACAGCCGAAACCACAGCAGAGGAACTTAAACCAGAGCCTCTCCAACAAGAACATTGTGGCTTACCCGACATTGAAGAATTTGCATATGCAAAGGCAATTGGATCTGCTCAGAAGAGACAGACAAAATCCACCACCAATGTGCGTCAACTGGGTAGTGAGGTTTGTTTACCTGTCGGGCCAAAAGGATCAATTTCCGCTCTATCGTCAAAGAGGAAATTTAAACAATGCATTTCACCTGATACAGCGGAATCACCTGCTAATTGGGAAAAAGTCCTTGAAGGGATTCGTAGAATGAGGTCTTGTGAAGATGCACCAGTAGACACTATGGGATGTGAGAAAGCTGGCAGCGTTTTACCACCAAAGGAAAGAAGATTTGCAGTTCTGGTGTCTGCGCTTCTATCAAGCCAAACCAAGGATAATGTCACTCATGGCAAGAGTTTTCCTTGGTGGAACTGTGTAACCATGGGTCCTAAGAACCTGGCGTTGTATGATGTATATCTATATCCTGATGTCGACAGAGCAGTTCAGCGGCTACTTGAAAATGGTCTACTTGCAGCCGAGACCATCAACAATGCCGATGAAGCGACTATCAAGAGCTTGATTTGCCCAGTCGGATTTTACTCAAGAAAGGCTGGTAACATGAAGAAAATTGCAAAAATTTGTCTCATGAACTATGAAGGAGACATCCCTGGTTCATTGGAGGAGTTGTTGTTACTTCCGGGAATAGGTCCTAAGATGGCTCACCTGGTAGGTTATGAACGTGGGATGGAACAACGTTCAAGGGATATGTGTAGACACTCATGTGCATCGCATTTGCAATCGGCTTCAATGGGTATCACGTCCAAGCACAAGACAGGTAGTTTTCTTTATTCTAATGATGATCCTAAGAAAACATCTACTCCTGAGCAAACAAGAGAGTCTTTGCAATTGTGGCTTCCAAAGGAAGAATGGGTTGCAATAAACCCTCTATTGGTTGGATTTGGACAAACGGTGTGTACTCCTCTTAGACCTCGCTGTGGAATGTGTGGCATAAACGATCTCTGTCCGTCTGCTTTCAAGGAGACAACAAGCCCGTCATCTAAAACAAAGAAGTCAAATCAGACTAAAAAATCTTGA
Protein:  
MSLILFRNYVLPFPSLQLNCKMSKTRLFAQKIPSKPEIPHPDVKPGSDSSNVVSGQEVRMYARKKRVRRTAETTAEELKPEPLQQEHCGLPDIEEFAYAKAIGSAQKRQTKSTTNVRQLGSEVCLPVGPKGSISALSSKRKFKQCISPDTAESPANWEKVLEGIRRMRSCEDAPVDTMGCEKAGSVLPPKERRFAVLVSALLSSQTKDNVTHGKSFPWWNCVTMGPKNLALYDVYLYPDVDRAVQRLLENGLLAAETINNADEATIKSLICPVGFYSRKAGNMKKIAKICLMNYEGDIPGSLEELLLLPGIGPKMAHLVGYERGMEQRSRDMCRHSCASHLQSASMGITSKHKTGSFLYSNDDPKKTSTPEQTRESLQLWLPKEEWVAINPLLVGFGQTVCTPLRPRCGMCGINDLCPSAFKETTSPSSKTKKSNQTKKS